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肝细胞内乙肝病毒的复制   [复制链接]

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发表于 2011-5-13 08:48 |只看该作者
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[size=1.3em]"变异的自身原因病毒复制的酶没有彻底半保留复制导致出现种种突变株,这是很自然的现象,只要有复制就会有差异。HBV还好,属于DNA病毒,突变的概率要比RNA病毒小几个数量级。
变异成功产生的结果取决于2个因素,1筛选的压力大小 2足够的数量/变异数量样本,对于某种特定治疗手段来说,筛选压力是一定的(就是杀伤能力),所以结果通常取决于数量/变异数量,相比较其他DNA病毒,乙肝病毒麻烦的是因为cccDNA提供了非常大的病毒库;RNA病毒同样麻烦的是因为RNA病毒复制的酶比DNA病毒更容易突变,所以对于RNA病毒流感、HIV变异是很普遍的现象,难以通过药物和抗体控制。只要有可以承受筛选压力突变株出现,治疗基本上就是失败了,因为在筛选压力的维持下,突变株马上会占主导地位,临床治疗上反跳就是代表变异株复制已占主要部分并且恢复了病毒的数量。恩替ETV筛选压力就比拉米LMV大得多,所以LMV就更容易耐药。
没有查精确的数字,但原理差不多是这样;我说的简单,准确的说HBV变异是在复制中突变产生的,临床上HBV变异现象(结果)的最主要是因为cccDNA提供了一个足够庞大的病毒数量库,因为如果没有cccDNA的话,临床上使用核苷类似物治疗HBV出现耐药的概率会非常低,核苷类似物其实是个很好的药物,除了耐药。"


hbv虽然是DNA病毒,但是里面有RNA 逆转录过程(核苷类药物控制点),所以HBV虽然是DNA病毒,但是带有RNA病毒的性质。这些变异了的病毒下次如果转变为cccDNA. 核苷药物就失效了。为什么有出现双核苷的药物,可以降低变异的风险(就是两个碱基连在一起的双核苷的analog,但这些分子不稳定,代谢也有问题?)





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发表于 2011-5-13 15:09 |只看该作者
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应用自
Drug Therapy
Hepatitis B Virus Infection
Jules L. Dienstag, M.D.



图中标出了核苷类药物的作用点,出了ETV可以在最开始的priming以外
其他的都作用在,pregenomicRNA->DNA (负链) 这里通过的是DNA RT polymerase. 这里从RNA到DNA
接下来从,DNA(负链)->DNA(正链) 这里应该还是通过上一步的DNA RT polymerase吗?这里只是DNA到DNA,如果在细胞核内是有DNApolymerase完成,但是这里理论上还是同一个病毒自己带的DNA  RT polymerase,核苷类的药物target的正式这个DNA TR polymerase。 通过碱基类似物,但是却不能保证链的延长。

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发表于 2011-5-13 16:14 |只看该作者
本帖最后由 StephenW 于 2011-5-13 16:15 编辑
lifevendor 发表于 2011-5-13 08:20
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关于是否整合,我觉得也可以做实验证明,分离出人的genomicDNA,设计pcr针对cccDNA ...

首先,我不太懂遗传学(genetics),我到这里来学习。
以下
在2005年发表土拨鼠cccDNA的集成的文件。
这是供
参考。
bigben446是乙肝病毒动物模型专家.



Hepatology.[/url] 2005 Dec;42(6):1453-5.
Hepatitis B virus cccDNA clearance: killing for curing?
Dandri M, Petersen J.
SourceMedizinische Klinik I, Gastroenterologie, Hepatologie und Infektiologie, Universitätsklinikum Hamburg--Eppendorf, Germany.

AbstractChronic hepadnavirus infections cause liver damage with ongoing death and regeneration of hepatocytes. In the present study, we set out to quantify the extent of liver turnover by measuring the clonal proliferation of hepatocytes by using integrated viral DNA as a genetic marker for individual hepatocyte lineages. Liver tissue from woodchucks with chronic woodchuck hepatitis virus (WHV) infection was assayed for randomly integrated viral DNA by using inverse PCR. Serial endpoint dilution of viral-cell junction fragments into 96-well plates, followed by nested PCR and DNA sequencing, was used to determine the copy number of specific viral cell junctions as a measure of the clonal distribution of infected cell subpopulations. The results indicated that the livers contained a minimum of 100,000 clones of >1,000 cells containing integrated DNA, representing at least 0.2% of the hepatocyte population of the liver. Because cells with integrated WHV DNA comprised only 1-2% of total liver cells, it is likely that the total number of clones far exceeds this estimate, with as much as one half of the liver derived from high copy clones of >1,000 cells. It may be inferred that these clones have a strong selective growth or survival advantage. The results provide evidence for a large amount of hepatocyte proliferation and selection having occurred during the period of chronic WHV infection (approximately 1.5 years) in these animals.


杂志。 2005年12月;42(6):1453- 5。
乙型肝炎病毒cccDNA的间隙:为固化杀呢?
Dandri M,彼得森

来源

>公司> Klinik我,Gastroenterologie,Hepatologie有限公司Infektiologie,Universitätsklinikum汉堡 -Eppendorf公司,德国。
摘要

慢性嗜肝病毒感染引起肝脏与正在进行的死亡和破坏肝细胞的再生。在本研究中,我们就建立了量化的测量采用作为个人综合肝细胞谱系病毒DNA遗传标记的肝细胞克隆增殖的肝营业额的程度。从慢性肝病土拨鼠肝炎病毒旱獭组织(WHV)感染检测的病毒DNA随机整合利用反向PCR。病毒细胞交界处的片段序列终点稀释到96孔板,用巢式PCR和DNA测序,来确定作为克隆感染细胞亚群分布的具体措施,病毒细胞连接的拷贝数。结果表明,肝脏载有10万>1000细胞中含有DNA的整合,代表至少0.2肝脏的肝细胞克隆%人口的最低水平。由于集成了WHVDNA细胞只占总额的1-2%,肝细胞,它很有可能是克隆的总人数大大超过了作为一个拥有那么多的从>1000细胞衍生的高拷贝克隆肝一半的估计。可以推断,这些克隆有很强的选择性生长或生存优势。研究结果为一对肝细胞增殖和选择过程中有大量的证据华纳家庭录影的慢性感染期在这些动物中(约1.5年)发生。

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发表于 2011-5-13 16:28 |只看该作者
本帖最后由 StephenW 于 2011-5-13 16:28 编辑
lifevendor 发表于 2011-5-13 15:27
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请参阅, 同一张幻灯片, 从不同组的德国研究人员. 它显示了cccDNA的池如何增加.

http://www.hbvhbv.com/forum/thread-1023775-1-4.html

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发表于 2011-5-14 21:42 |只看该作者
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The Replication cycle of Hepatitis B virus
Stephan Urban Andreas Schulze Maura Dandri Joerg Petersen
(1) Reversible and non-cell-type specific attachment to cellassociated
heparan sulfate proteoglycans.
(2) Specific and probably irreversible binding to an unknown
hepatocyte-specific preS1-receptor. This step presumably
requires activation of the virus resulting in exposure of
the myristoylated N-terminus of the L-protein [1].
(3) Two different entry pathways have been proposed: (3A)
endocytosis followed by release of nucleocapsids from
endocytic vesicles; (3B) fusion of the viral envelope at
the plasma membrane.
(4) Cytoplasmic release of the viral nucleocapsid containing
the relaxed circular partially double stranded DNA (rcDNA)
with its covalently linked polymerase.
(5) Transport of the nucleocapsid along microtubules. Accumulation
of the capsids at the nuclear envelope facilitates
interactions with adaptor proteins of the nuclear pore
complex.
(6) Possible trapping of the nucleocapsid in the nuclear basket
and release of rcDNA into the nucleoplasm. The mechanisms
determining the breakdown of the capsid and the
release of the viral DNA genome are unsolved [2].
(7) ‘‘Repair” of the incoming rcDNA: Completion of the plus
strand of the rcDNA by the viral polymerase. Removal of
the polymerase from the 50-end of the minus strand
DNA. Removal of a short RNA-primer used for the DNAplus
strand synthesis. Both processes are mediated by cellular
enzymes [3].
(8) cccDNA formation by covalent ligation of both DNA
strands (reviewed in [3]). The cccDNA molecule is organized
as a chromatin-like structure displaying the typical
beads-on-a string arrangement consisting of both histone
and non-histone proteins (minichromosome) [4]. The lack
of cccDNA in artificial host cells (e.g. hepatocytes of HBV
transgenic mice) suggests that host specific factors may
regulate cccDNA formation.
(9) Transcription. The cccDNA utilizes the cellular transcriptional
machinery to produce all viral RNAs necessary for
protein production and viral replication. Both host transcription
factors, such as CCAAT/enhancer-binding protein
(C/EBP) and hepatocyte nuclear factors (HNF) and viral
proteins (core, the regulatory X-protein) regulate this
process [4] and may modulate viral gene expression byinteracting with the viral promoters of the four major
overlapping open reading frames (ORFs): (I) the precore/
core gene, coding for the nucleocapsid protein and for
the non-structural, secreted, precore protein, the HBeAg;
(II) the polymerase gene coding for the reverse transcriptase,
RNase H and terminal protein domains; (III) the
L-,M-, and S-gene, coding for the three envelope proteins,
which are synthesized in frame from different promoters;
and (IV) the X gene, coding for the small regulatory X-protein.
A correlation between viremia levels and the acetylation
status of cccDNA-bound histones has been reported
[5], indicating that epigenetic mechanisms can regulate
the transcriptional activity of the cccDNA.
(10) All 4 major mRNAs utilize a single common polyadenylation
signal. Processing of viral RNAs, nuclear export as
well as stabilization of the viral RNAs appears to be exclusively
mediated by host factors (i.e. La RNA binding
protein).
(11) Translation of the pregenomic RNA (pgRNA) to the core
protein and the viral polymerase. The regulatory X-protein
and the three envelope proteins are translated from the
subgenomic RNAs.
(12) Complex formation of the pgRNA (via its epsilon stemloop
structure) with the core protein and the polymerase
and self-assembly of an RNA-containing nucleocapsid.
(13) Reverse transcription of the pgRNA followed by plusstrand
DNA-synthesis within the nucleocapsid. Maturation
of the RNA-containing nucleocapsids to DNA-containing
nucleocapsids within the cytoplasm.
(14) DNA-containing nucleocapsids can be either re-imported
into the nucleus to form additional cccDNA molecules
(14A) or can be enveloped for secretion (14B). The envelope
proteins are co-translationally inserted into the ER
membrane, where they bud into the ER lumen, and are
secreted by the cell, either as 22 nm subviral envelope particles
(SVPs) or as 42 nm infectious virions (Dane particles)
if they have enveloped the DNA-containing nucleocapsids
before budding. During synthesis of the L-protein, the
preS-domains remain cytoplasmically exposed and
become myristoylated. At some step after preS-mediated
nucleocapsid envelopment translocation across the membrane
occurs.
(15) Experiments performed using duck hepatitis B revealed
that the majority of cccDNA molecules in infected hepatocytes
comes from newly synthesized nucleocapsids. 1–50
cccDNA molecules appear to accumulate per cell, thoughdifferences in cccDNA dynamics and efficiency of cccDNA
accumulation may exist between HBV and the other hepadnaviruses.
Both viral and host factors controlling cccDNA
formation and pool size are yet poorly defined. A negativefeedback
mechanism suppressing cccDNA amplification
might involve the L-protein. As HBV polymerase inhibitors
do not directly affect the cccDNA, a decrease in cccDNA
levels is supposed to derive from the lack of sufficient recycling
of viral nucleocapsids to the nucleus, due to inhibition
of viral DNA-synthesis in the cytoplasm, and less
incoming viruses from the blood [6].
(16) Compared to virions spherical and filamentous SVPs are
secreted in a 103–106-fold excess into the blood of infected
individuals. SVPs lack a nucleocapsid and are therefore
non-infectious.

Therapeutic agents interfering with HBV life-cycle: (I) Acylated
preS1-peptides have been shown to bind the HBV-receptor
and block viral entry in vivo [7]; (II) Dihydroarylpyrimidines
interfere with nucleocapsid assembly and induce core protein
degradation [8]. (III) Polymerase inhibitors suppress reverse transcription
and synthesis of the DNA-plus strand. The preS1-
derived lipopeptides and the dihydroarylpyrimidines are presently
in preclinical development. Nucleos(t)ide analogues (Lamivudine,
Adefovir, Entecavir, Telbivudine, Tenofovir) and
interferon (IFN) a / PEG-IFN a are the only currently approved

therapeutic treatments. IFN a inhibits HBV both through immune
modulatory effects and directly by reducing steady-state levels of
HBV transcripts.
References
[1] Urban S. New insights into hepatitis B and hepatitis delta virus entry. Future
Virol 2008;3 (3):253–264.
[2] Kann M, Schmitz A, Rabe B. Intracellular transport of hepatitis B virus. World J
Gastroenterol 2007;13 (1):39–47.
[3] Nassal M. Hepatitis B viruses: reverse transcription a different way. Virus Res
2008;134 (1–2):235–249.
[4] Levrero M, Pollicino T, Petersen J, Belloni L, Raimondo G, Dandri M. Control of
cccDNA function in hepatitis B virus infection. J Hepatol 2009;51
(3):581–592.
[5] Pollicino T, Belloni L, Raffa G, Pediconi N, Squadrito G, Raimondo G, et al.
Hepatitis B virus replication is regulated by the acetylation status of hepatitis
B virus cccDNA-bound H3 and H4 histones. Gastroenterology 2006;130
(3):823–837.
[6] Zoulim F. New insight on hepatitis B virus persistence from the study of
intrahepatic viral cccDNA. J Hepatol 2005;42 (3):302–308.
[7] Petersen J, Dandri M, Mier W, Lutgehetmann M, Volz T, Von Weizsäcker F,
et al. Prevention of hepatitis B virus infection in vivo by entry inhibitors
derived from the large envelope protein. Nat Biotechnol 2008;26
(3):335–341.
[8] Deres K, Schröder CH, Paessens A, Goldmann S, Hacker HJ, Weber O, et al.
Inhibition of hepatitis B virus replication by drug-induced depletion of
nucleocapsids. Science 2003;299 (5608):893–896.


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发表于 2011-5-14 22:40 |只看该作者
lifevendor 发表于 2011-5-14 21:42
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Many thanks, it is awesome.
Is this from a paper by Stephen Urban? He is head of the Lab at the University of Heildberg, Germany, that is experimenting with Mycrulex, a surface entry blocker for HBV?


Stephan Urban
Head of Hepatitis B Research Group

Phone: +49 (0)6221-56 4902
Fax: +49 (0)6221-56 1946

[email protected]


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发表于 2011-5-15 10:02 |只看该作者
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是的。
雄关慢道真如铁,而今迈步从头越
Battle Without Honor or Humanity
每天学习一点点,乙肝总可以被解决。
http://lifevendor.blog.163.com/
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"hbv虽然是DNA病毒,但是里面有RNA 逆转录过程(核苷类药物控制点),所以HBV虽然是DNA病毒,但是带有RNA病毒的性质。"

这句话具体是什么意思?看来有还有很多东西要学习。有时间去看看上面那本hbv的教科书。。

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发表于 2011-5-15 14:15 |只看该作者
本帖最后由 StephenW 于 2011-5-15 14:16 编辑
cshbv 发表于 2011-5-15 14:07
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"hbv虽然是DNA病毒,但是里面有RNA 逆转录过程(核苷类药物控制点),所以HBV虽然 ...


乙肝病的毒神奇是,它可以制造其自己的DNA. 在正常的细胞,DNA为模板,旨在生产蛋白质,DNA的重复需要丝分裂过程(mitosis).
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