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本帖最后由 yangfee 于 2011-7-17 00:17 编辑
回复 日月同辉81 的帖子
我可以。
hbv基因组
http://www.ncbi.nlm.nih.gov/nuccore/NC_003977
Hepatitis B virus, complete genomeNCBI Reference Sequence: NC_003977.1 FASTA Graphics
LOCUS NC_003977 3215 bp DNA circular VRL 14-MAR-2011DEFINITION Hepatitis B virus, complete genome.ACCESSION NC_003977VERSION NC_003977.1 GI:21326584DBLINK Project: 15428KEYWORDS C gene; circular; core antigen; DNA polymerase; e antigen; genome; overlapping genes; P gene; S gene; surface antigen; X gene.SOURCE Hepatitis B virus ORGANISM Hepatitis B virus Viruses; Retro-transcribing viruses; Hepadnaviridae; Orthohepadnavirus.REFERENCE 1 (bases 1 to 3215) AUTHORS Okamoto,H., Imai,M., Shimozaki,M., Hoshi,Y., Iizuka,H., Gotanda,T., Tsuda,F., Miyakawa,Y. and Mayumi,M. TITLE Nucleotide sequence of a cloned hepatitis B virus genome, subtype ayr: comparison with genomes of the other three subtypes JOURNAL J. Gen. Virol. 67 (PT 11), 2305-2314 (1986) PUBMED 3783127REFERENCE 2 (bases 1 to 3215) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (05-JUN-2002) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USACOMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from X04615. COMPLETENESS: full length. 。。。。。。。。。 CDS join(2848..3215,1..835) /locus_tag="HBVgp2" /note="pre-S1/pre-S2/S" /codon_start=1 /product="large S protein" /protein_id="YP_355333.1" /db_xref="GI:77680739" /db_xref="GeneID:944569" /translation="MGGWSSKPRQGMGTNLSVPNPLGFFPDHQLDPAFGANSNNPDWD FNPNKDHWPEANQVGAGAFGPGFTPPHGGLLGWSPQAQGILTTLPAAPPPASTNRQSG RQPTPISPPLRDSHPQAMQWNSTTFHQALLDPRVRGLYFPAGGSSSGTVNPVPTTASP ISSIFSRTGDPAPNMESTTSGFLGPLLVLQAGFFLLTRILTIPQSLDSWWTSLNFLGG APTCPGQNSQSPTSNHSPTSCPPTCPGYRWMCLRRFIIFLFILLLCLIFLLVLLDYQG MLPVCPLLPGTSTTSTGPCRTCTIPAQGTSMFPSCCCTKPSDGNCTCIPIPSSWAFAR FLWEWASVRFSWLSLLVPFVQWFVGLSPTVWLSAIWMMWYWGPSLYNILSPFLPLLPI FFCLWVYI".............................. 1 ctccacaaca ttccaccaag ctctgctaga tcccagagtg aggggcctat attttcctgc 61 tggtggctcc agttccggaa cagtaaaccc tgttccgact actgcctcac ccatatcgtc 121 aatcttctcg aggactgggg accctgcacc gaacatggag agcacaacat caggattcct 181 aggacccctg ctcgtgttac aggcggggtt tttcttgttg acaagaatcc tcacaatacc 241 acagagtcta gactcgtggt ggacttctct caattttcta gggggagcac ccacgtgtcc 301 tggccaaaat tcgcagtccc caacctccaa tcactcacca acctcttgtc ctccaacttg 361 tcctggctat cgctggatgt gtctgcggcg ttttatcata ttcctcttca tcctgctgct 421 atgcctcatc ttcttgttgg ttcttctgga ctaccaaggt atgttgcccg tttgtcctct 481 acttccagga acatcaacta ccagcacggg accatgcaga acctgcacga ttcctgctca 541 aggaacctct atgtttccct cttgttgctg tacaaaacct tcggacggaa actgcacttg 601 tattcccatc ccatcatcct gggctttcgc aagattccta tgggagtggg cctcagtccg 661 tttctcctgg ctcagtttac tagtgccatt tgttcagtgg ttcgtagggc tttcccccac 721 tgtttggctt tcagctatat ggatgatgtg gtattggggg ccaagtctgt acaacatctt 781 gagtcccttt ttacctctat taccaatttt cttttgtctt tgggtataca tttgaaccct 841 aataaaacca aacgttgggg ctactccctt aacttcatgg gatatgtaat tggaagttgg 901 ggtactttac cgcaggaaca tattgtacaa aaactcaagc aatgttttcg aaaattgcct 961 gtaaatagac ctattgattg gaaagtatgt caaagaattg tgggtctttt gggctttgct 1021 gcccctttta cacaatgtgg ctatcctgcc ttgatgcctt tatatgcatg tatacaatct 1081 aagcaggctt tcactttctc gccaacttac aaggcctttc tgtgtaaaca atatctaaac 1141 ctttaccccg ttgcccggca acggtcaggt ctctgccaag tgtttgctga cgcaaccccc 1201 acgggttggg gcttggccat aggccatcgg cgcatgcgtg gaacctttgt ggctcctctg 1261 ccgatccata ctgcggaact cctagcagct tgttttgctc gcagccggtc tggagcgaaa 1321 cttatcggaa ccgacaactc agttgtcctc tctcggaaat acacctcctt tccatggctg 1381 ctaggctgtg ctgccaactg gatcctgcgc gggacgtcct ttgtctacgt cccgtcggcg 1441 ctgaatcccg cggacgaccc gtctcggggc cgtttgggcc tctaccgtcc ccttcttcat 1501 ctgccgttcc ggccgaccac ggggcgcacc tctctttacg cggtctcccc gtctgtgcct 1561 tctcatctgc cggaccgtgt gcacttcgct tcacctctgc acgtagcatg gagaccaccg 1621 tgaacgccca ccaggtcttg cccaaggtct tacacaagag gactcttgga ctctcagcaa 1681 tgtcaacgac cgaccttgag gcatacttca aagactgttt gtttaaagac tgggaggagt 1741 tgggggagga gattaggtta aaggtctttg tactaggagg ctgtaggcat aaattggtct 1801 gttcaccagc accatgcaac tttttcccct ctgcctaatc atctcatgtt catgtcctac 1861 tgttcaagcc tccaagctgt gccttgggtg gctttggggc atggacattg acccgtataa 1921 agaatttgga gcttctgtgg agttactctc ttttttgcct tctgacttct ttccttctat 1981 tcgagatctc ctcgacaccg cctctgctct gtatcgggag gccttagagt ctccggaaca 2041 ttgttcacct caccatacag cactcaggca agctattctg tgttggggtg agttgatgaa 2101 tctggccacc tgggtgggaa gtaatttgga agacccagca tccagggaat tagtagtcag 2161 ctatgtcaat gttaatatgg gcctaaaaat tagacaacta ttgtggtttc acatttcctg 2221 ccttactttt ggaagagaaa ctgtccttga gtatttggtg tcttttggag tgtggattcg 2281 cactcctccc gcttacagac caccaaatgc ccctatctta tcaacacttc cggaaactac 2341 tgttgttaga cgacgaggca ggtcccctag aagaagaact ccctcgcctc gcagacgaag 2401 gtctcaatcg ccgcgtcgca gaagatctca atctcgggaa tctcaatgtt agtatccctt 2461 ggactcataa ggtgggaaac tttactgggc tttattcttc tactgtacct gtctttaatc 2521 ctgattggaa aactccctcc tttcctcaca ttcatttaca ggaggacatt attaatagat 2581 gtcaacaata tgtgggccct ctgacagtta atgaaaaaag gagattaaaa ttaattatgc 2641 ctgctaggtt ctatcctaac cttaccaaat atttgccctt ggacaaaggc attaaaccgt 2701 attatcctga atatgcagtt aatcattact tcaaaactag gcattattta catactctgt 2761 ggaaggctgg cattctatat aagagagaaa ctacacgcag cgcctcattt tgtgggtcac 2821 catattcttg ggaacaagag ctacagcatg ggaggttggt cttccaaacc tcgacaaggc 2881 atggggacga atctttctgt tcccaatcct ctgggattct ttcccgatca ccagttggac 2941 cctgcgttcg gagccaactc aaacaatcca gattgggact tcaaccccaa caaggatcac 3001 tggccagagg caaatcaggt aggagcggga gcatttggtc cagggttcac cccaccacac 3061 ggaggccttt tggggtggag ccctcaggct cagggcatat tgacaacact gccagcagca 3121 cctcctcctg cctccaccaa tcggcagtca ggaagacagc ctactcccat ctctccacct 3181 ctaagagaca gtcatcctca ggccatgcag tggaa
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