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Gene. 2018 Mar 8. pii: S0378-1119(18)30263-4. doi: 10.1016/j.gene.2018.03.025. [Epub ahead of print]
Epigenome-wide study for the offspring exposed to maternal HBV infection during pregnancy, a pilot study.
Cheng Q1, Zhao B1, Huang Z1, Su Y1, Chen B2, Yang S2, Peng X1, Ma Q3, Yu X1, Zhao B4, Ke X5.
Author information
1
State Key Laboratory of Molecular Vaccinology and Molecular Diagnostics, School of Public Health, Xiamen University, Fujian, China.
2
Women and Children's medical center, Siming District, Xiamen, Fujian, China.
3
Neurology Department, the First Affiliated Hospital of Xiamen University, Xiamen, Fujian, China.
4
State Key Laboratory of Molecular Vaccinology and Molecular Diagnostics, School of Public Health, Xiamen University, Fujian, China. Electronic address: [email protected].
5
State Key Laboratory of Molecular Vaccinology and Molecular Diagnostics, School of Public Health, Xiamen University, Fujian, China. Electronic address: [email protected].
Abstract
BACKGROUND & AIM:
Hepatitis B virus (HBV) can be transmitted to infants, and is related to infants' later disease risk. Epigenetic change (such as DNA methylation) may be mechanism underlying the relationship. In this study, we aimed to investigate whether prenatal HBV infection could alter DNA methylation status in newborns.
METHOD:
We selected 12 neonates with intrauterine HBV infection whose mothers were HBsAg-positive during pregnancy, relative to 12 HBV-free neonates with HBsAg-negative mothers. The pattern of genome-wide DNA methylation in the umbilical cord blood was investigated by Illumina Infinium Human Methylation 450 K BeadChip.
RESULT:
The average level of global methylation in infected neonates exposed to maternal HBV infection was not significantly different from controls. However, after adjusting for multiple comparisons, we found differential significance in the cases group compared to the controls for 663 CpG sites, associated with 534 genes. Among these sites, 53.85% (357/663) had decreased methylation (ΔM < 0) and 46.15% (306/663) had increased methylation (ΔM > 0). The average percentage change (Δβ) in methylation ranged from -46% to 36%. Validated by pyrosequencing, we identified 4 significantly differentially methylated CpG sites in the KLHL35 gene and additional CpGs for the CPT1B gene. These genes play a role in the development of hepatocellular and colorectal carcinoma and fatty acid oxidation, suggesting the candidature of these genes in HBV related disease.
CONCLUSION:
Prenatal HBV exposure, even without malformation or preterm birth, may alter the epigenome profile in newborns. We identified a set of genes with differentially methylated CpG sites presented in the cord blood of HBV-infected newborns with HBsAg-positive mothers, demonstrating that DNA methylation status at birth can be used as a biomarker of prenatal exposure. These DNA methylation differences suggest a possible role for epigenetic processes in neonatal development in response to prenatal HBV exposure.
Copyright © 2017. Published by Elsevier B.V.
KEYWORDS:
DNA methylation; Human methylation 450 Beadchip; Prenatal HBV infection
PMID:
29526602
DOI:
10.1016/j.gene.2018.03.025
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