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Cyclophilin Inhibitors: A New, Multifunctional Drug Class
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Ciclofilin Pharmaceuticals Inc. has developed a pipeline of novel, proprietary cyclophilin inhibitors (CPIs) using in-house expertise, which have the potential to treat a wide variety of diseases and disorders.
Cyclophilins are a family of evolutionarily conserved proteins that are found in most cells in the body. Their most recognized activity is enzymatic regulation of the cis-trans isomeric structure of peptidyl-proline bonds in target proteins. Peptidyl-proline bonds are abundant in nature, and their isomeric conformation increasingly is being recognized as an important regulator of protein function (1). As such, cyclophilin isomerases represent an important class of protein folding enzyme. Their involvement in protein maturation and trafficking also afford them classification as molecular chaperones. Some cyclophilin isoforms also are secreted by cells and act as chemokines or cytokines by binding and activating cell surface receptors, especially CD147. CD147 activation commonly is involved in inflammatory events (2). Through these interactions cyclophilins play roles in mitochondrial function, calcium homeostasis, oxidative stress, intracellular signaling, leukocyte trafficking, cellular responses to injury, and other processes (3). Despite these prominent roles, studies indicate that genetic deletion or inhibition of individual cyclophilins do not seriously impact normal physiology. Thus, cyclophilins appear to contribute to, but are not absolutely necessary for physiological stability under normal conditions.
In contrast, cyclophilins have been shown to play pivotal roles in many diseases and injury conditions by exacerbating pathological processes and propagating disease phenotypes (4). For example, cyclophilin D activity promotes mitochondrial transition pore opening and mitochondria-mediated cell death in ischemia-reperfusion and other disorders involving oxidative stress and intracellular calcium overload. In many inflammatory diseases, secreted cyclophilin causes excessive accumulation and activation of neutrophils, lymphocytes, and macrophages. Cyclophilin expression is upregulated in several types of cancer, which may assist in metastasis. In various types of liver disease cyclophilins participate in inflammation, fibrosis, and cell death (5). Conversely, cyclophilin inhibition is protective across a spectrum of experimental disease models, including those for heart attack, stroke, traumatic brain injury, multiple sclerosis, ALS, Alzheimers, atherosclerosis, asthma, and arthritis. Thus, cyclophilins are attractive therapeutic targets for many diseases.
Cyclophilins in Infectious Diseases
Cyclophilins also play important roles in the life cycles of many viruses, bacteria, and other pathogens (6). Viruses that hijack and utilize host cell cyclophilins to replicate and disseminate disease include hepatitis C virus (HCV), human immunodeficiency virus (HIV-1), hepatitis B virus (HBV), and multiple coronaviruses (e.g. SARS). HCV and HIV-1 are the viruses for which the roles of cyclophilins are best described (7). In HCV infection, cyclophilin A is bound by the nonstructural protein, NS5A, which is necessary for viral replication. Proper NS5A function is dependent on cyclophilin A isomerase activity. In HIV-1 infection, cyclophilin A binds to the viral capsid which appears to stabilize the capsid core, promote nuclear entry, and ultimately facilitate reverse transcription. Cyclophilin binding by HIV-1 is also a mechanism used to evade immune recognition in infected macrophages. Thus, cyclophilin inhibitors stand to be the next generation of broadly-acting antiviral agent for some of the most prevalent viral diseases of our time.
Ciclofilin Pharmaceuticals' CPI Compounds
Ciclofilin Pharmaceuticals' expertise in cyclosporin chemistry, the backbone of cyclophilin inhibitors, and comprehensive screening programs has led to the discovery of many proprietary compounds with high in vitro potency (low nanomolar) cyclophilin inhibition, low cytotoxicity, and excellent pharmacokinetic and pharmacodynamics properties. In addition, the flexibility in our chemical platform means that the compounds are customizable to meet the needs of specific diseases.
CPI-431-32 is Ciclofilin Pharmaceuticals' lead medicinal candidate for difficult-to-treat hepatitis patients. CPI-431-32 arose from several years of nonclinical testing, optimization, and third-party validation. The compound potently inhibits HCV and HIV-1 in vitro, including simultaneous inhibition of these viruses in a coinfection model. In contrast to many antivirals that directly target viruses (direct acting antivirals; DAAs), CPI-431-32 targets host cyclophilin and therefore has a high barrier to emergence of drug resistance. CPI-431-32 also demonstrates an advantage in being highly potent towards all HCV genotypes, including genotype 3 (i.e., pangenotypic), unlike most HCV DAAs which show much less antiviral potency towards HCV genotype 3. Ciclofilin Pharmaceuticals' extensive discovery and optimization programs have laid the groundwork for rapid advancement of its lead compound through preclinical toxicology testing and submission of an Investigation New Drug application.
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