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TITLE: HAPs hepatitis B virus (HBV) capsid inhibitors block core protein interaction with the viral minichromosome and host cell genes and affect cccDNA transcription and stability
AUTHORS (FIRST NAME, LAST NAME): Laura Belloni1, 2, Lichun Li4, Gianna Aurora Palumbo1, 3, Srinivas Reddy Chirapu 5, Ludovica Calvo1, 3, Mg Finn6, Uri Lopatin7, Adam Zlotnick4, 7, Massimo Levrero1, 2
Institutional Author(s):
INSTITUTIONS (ALL): 1. Dept. Internal Medicine (DMISM), Sapienza University Rome, Rome, Italy.
2. Life Nanosciences Laboratory, Sapienza University Rome, Rome, Italy.
3. EAL Inserm U785, Sapienza University Rome, Rome, Italy.
4. Department of Molecular & Cellular Biochemistry, Indiana University, Bloomington, IN 47405 , IN, United States.
5. Department of Chemistry and Biochemistry and The Skaggs Institute for Chemical Biology, The Scripps Research Institute, La Jolla, CA, United States.
6. Dept Chemistry, Georgia Institute of Technology, Atlanta, GA 30332, GA, United States.
7. Assembly Pharmaceuticals, Bloomington, IN 47401, IN, United States.
ABSTRACT BODY: Background and aim: The development of novel therapies for HBV infection requires new antivirals that target viral life cycle functions other than the viral polymerase. HBV Core protein (Cp) represents an attractive new therapeutic target. Cp capsid assembly is critical for viral RNA packaging, reverse transcription and intracellular trafficking. Core proteins have been shown to bind the nuclear cccDNA, possibly contributing to the regulation of its function and stability. Hetero-aryl-dihydropyrimidines (HAPs), a new class of antivirals inhibiting HBV replication in vitro and in vivo, enhance the rate and the extent of Cp assembly and, at high concentration, stabilize preferentially non-capsid polymers of Cp. Here we investigated the impact of HAP12 on cccDNA formation, levels and transcription as part of its antiviral activity against HBV.
Methods: Capsid-associated HBV-DNA (TaqMan real-time PCR), cccDNA (TaqMan real-time PCR) and pgRNA levels (quantitative real-time PCR with specific primers), were assessed in: a) HepG2 cells transfected with full length HBV genomes; b) the inducible HepAD38 stable HBV cell line, left untreated or treated with the hetero-aryl-dihydropyrimidine HAP12 at 1-5 microM. Recruitment of HBc and histone modifications on host genes and the viral minichromosome were assessed using standard ChIP and the cccDNA ChIP assay, respectively.
Results: HAP12 treatment of cells transfected with wild type linear HBV genomes showed a complete suppression of HBV replication at 72 and 96 hrs with a peak >50% reduction of pgRNA transcription at 96 hours. The strong HAP12 inhibitory effect on pgRNA transcription and HBV replication was confirmed in the HepAD38 HBV inducible cell line. Following induction of HBV from an integrated transgene, HepAD38 cells have been show to accumulate cccDNA. A sharp, time-dependent reduction of steady state cccDNA levels in HepAD38 cells was observed with HAP12. Additionally, HAP12 treatment both inhibited HBc occupancy of cccDNA in induced HepAD38 cells and reduced cccDNA-bound H3 histone acetylation. Interestingly, HAP12 treatment also reduced H3 histone acetylation and HBc occupancy of the host c-Src oncogene promoter region.
Conclusions: Targeting HBV Cp with HAPs results in inappropriate capsid assembly and function, presumably secondary to conformational changes in Cp oligomers. HAP12 treated cells demonstrate impaired functional capsid formation, reduced viral replication at both the DNA and pgRNA level, as well as altered Cp interaction with both host genes and the HBV cccDNA.
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